CDS

Accession Number TCMCG016C12235
gbkey CDS
Protein Id OMO80274.1
Location complement(join(68914..69665,70264..70723,70936..70980,71141..71189,71291..71388,71519..71557,71796..71855,72447..72489,72622..72692,72768..72863,73158..73214,73321..73433,73523..73543,74006..74381))
Organism Corchorus capsularis
locus_tag CCACVL1_13059

Protein

Length 759aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010315.1
Definition Geminivirus AR1/BR1 coat protein [Corchorus capsularis]
Locus_tag CCACVL1_13059

EGGNOG-MAPPER Annotation

COG_category L
Description Non-canonical poly(A) RNA polymerase
KEGG_TC -
KEGG_Module M00393        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K03514        [VIEW IN KEGG]
EC 2.7.7.19        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004652        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008334        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010586        [VIEW IN EMBL-EBI]
GO:0010587        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016074        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031126        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032204        [VIEW IN EMBL-EBI]
GO:0032205        [VIEW IN EMBL-EBI]
GO:0032210        [VIEW IN EMBL-EBI]
GO:0032211        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033500        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034661        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043144        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0043629        [VIEW IN EMBL-EBI]
GO:0043630        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043633        [VIEW IN EMBL-EBI]
GO:0043634        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051053        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070566        [VIEW IN EMBL-EBI]
GO:0071044        [VIEW IN EMBL-EBI]
GO:0071050        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1904356        [VIEW IN EMBL-EBI]
GO:1904357        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000278        [VIEW IN EMBL-EBI]
GO:2000279        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAACAAACAGTCACTAATTCGCAACCCATTCTCTACGAGACGATATTCCTAAACCCAATTTCTCTGCCCTCATCGCCCACTGCTGAATCTCCTCCGTCCGACGAACTTCCTCTCGAACCATACACCGTCTTCCGCAACGAAATCTCCCTGTCTGCTGAAAATACCATCTCCGTAGACTCGGCCGCGCCGGATTATTTTTCCCTTGATCTTAATGAGTCCGATGAGCCGGTGCCAGCTCAGACTCCGGTCTCGGCTTGGGATGAACCAGGGCCCAAGAAGCCCAATACCGTGGATGAGCCAAGGCTTGAGAACCAGGGGTGGTTTCGTGGGAATAGTCGGTTTAAAAGTCCAATGCTTCAGTTGCATAAAGTGCATTGGGTGCTTGTTGTTGAGATAGTGGACTTTTGTGATTTCCTATCACCAACTCCAGAAGAGCAAGCAGCACGTGATGCGGCTGTGGCTTCTGTTTTTGATGTTATCAAATACATATGGCCTGCCTGCAGGCCAGAAGTTTTTGGGTCATTCAGTACGGGACTTTATTTACCAACAAGTGATATCGATGTTGTGATTCTAGGGTCGGGTATAAAAAATCCACAGACTGGTTTGCATGCTCTTTCCAGGGCATTATCTCAGAGGGGGATTGCAAAAAGGATACAGGTGATTGCAAAAGCTCGCGTTCCCATAATTAAATTTGTAGAAAAGAAAAGTGGTGTTGCATTTGATATAAGCTTTGATGTGGAAAATGGGCCAAAAGCTGCCGAGTTTATCAAGGTATATTCAGGTGGAATAGGTTCATACGCTCTCCTTGCGATGCTCATGGCTATGTTGCAGAGTTTGCGTGACCCTGAACATAATTTGGGGATGCTCTTGGTACACTTCTTTGATTTCTATGGACGCAAATTGAACACTGTGGATGTCGGAGTGTCTTGCAAAGGGGGAGGCACTTTCTTCTTAAAAAGTAGTAGGGGGTTTTCAAACAAAGGACGACCATTTCTCATCTCCATTGAGGATCCACAGGCTCCAGACAATGACATTGGGAAGAACTCATTTAACTATATCCAGATTAGATCAGCTTTTGGGATGGCTTTGAGTACCTTGACTAATGCAAAACTCATCTTGTCTCTGGGCCCAAGTAGAAGCATTCTCGGTACCATAATTAGACCAGATCCTGTTTTGCTTGAACGGAAAGGAGGATCTAGTGGGGCTGTCACTTTTAGTAGCTTGCTTCCTGGAGCTGGGGAGCCTTTACAGCAATCATATTCAGAGCAACAGGATATTTTATGCAATTGGCAGTTAGATGATGAAGAACCACTGCCTCGAGGACATGGAAATGCCGGAGATGTCAGTGCTCAGTCCTCTGGGAGAAAGAGGAAATCAAGGTCCAAAAAGAAGAAAGCAAAAGAAAACGGTGATGTAAGGAAGGTCTGGGATGAAGAAGAAACAGTATTAAAGAAAGAAAAGAGTTCGAGAAAGAAAAGTTCTAGACATAGCCGTAGCGATGCCAATGGTTTTAGTCGGCATGGTATACGTTACAGCAACAACACCATGAATCGTGCTAAGTACAACAGACCTGTGGGTCGTCGATCTTTTGTTTATAGGCGCGGTCCAAAGGTACGTGTTAATCAGTCTGTGCCAAAGTCACAGGGTGACAAGATGACCAAACAGCGTATCCATGAAAATCAGTATGGCGTGCAGTATTCTCTATTGAACAATACGTCCAGTGTGTCTTTTATTACGTATCCTAGATTAGGTGGGCCTGAGCCCAATAGGAGTCGGGCTTACATAAAATTGAATAGGCTTCGGTACAAGGGGACTGTTAATATTGAGTGTGCAGATCCAGATGTTGGAATGGACCCTAATCGTGGTGGGCTTTCTGGAGTATTTACTTTGGCCATAGTTGTTGACAGGAAACCTCATGTTGGACCTACTGGTTCACTGCCAACTTTTGACGATCTGTTTGGGTGCAATCTGTACAGCAATGGGAGCCTTGATATCTCACCCCAGATGAAGCAGCGTTACTACATTCGGCACGTACACAAGCGTGTCGTATCTTATGAGAAGGACTCGATCATGATGAACATATCGGGCAATATGGGATTATCTTCTCCAAAATATGTATGTTGGTCCTCATTCAAGGACCTTGATGTGGATAGTTGCACTGGGAGCTATTCTAATTTAGCCAAGAATGCCTTGTTAGTATATTATTGTTGGGTATCGAACATGCCTTCTAAGGCATCATCATTTGTATCTTTTGACCTGGATTATCTGGGTTAA
Protein:  
MEEQTVTNSQPILYETIFLNPISLPSSPTAESPPSDELPLEPYTVFRNEISLSAENTISVDSAAPDYFSLDLNESDEPVPAQTPVSAWDEPGPKKPNTVDEPRLENQGWFRGNSRFKSPMLQLHKVHWVLVVEIVDFCDFLSPTPEEQAARDAAVASVFDVIKYIWPACRPEVFGSFSTGLYLPTSDIDVVILGSGIKNPQTGLHALSRALSQRGIAKRIQVIAKARVPIIKFVEKKSGVAFDISFDVENGPKAAEFIKVYSGGIGSYALLAMLMAMLQSLRDPEHNLGMLLVHFFDFYGRKLNTVDVGVSCKGGGTFFLKSSRGFSNKGRPFLISIEDPQAPDNDIGKNSFNYIQIRSAFGMALSTLTNAKLILSLGPSRSILGTIIRPDPVLLERKGGSSGAVTFSSLLPGAGEPLQQSYSEQQDILCNWQLDDEEPLPRGHGNAGDVSAQSSGRKRKSRSKKKKAKENGDVRKVWDEEETVLKKEKSSRKKSSRHSRSDANGFSRHGIRYSNNTMNRAKYNRPVGRRSFVYRRGPKVRVNQSVPKSQGDKMTKQRIHENQYGVQYSLLNNTSSVSFITYPRLGGPEPNRSRAYIKLNRLRYKGTVNIECADPDVGMDPNRGGLSGVFTLAIVVDRKPHVGPTGSLPTFDDLFGCNLYSNGSLDISPQMKQRYYIRHVHKRVVSYEKDSIMMNISGNMGLSSPKYVCWSSFKDLDVDSCTGSYSNLAKNALLVYYCWVSNMPSKASSFVSFDLDYLG